
Boutique hotel holiday rentals in Shinjuku
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Top-Rated Boutique Hotels in Shinjuku
Guests agree: These boutique hotel rentals are highly rated for location, cleanliness and more.
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Popular amenities for Shinjuku Boutique Hotels
Family-Friendly Boutique Hotels

4 single beds in Tokyo/2 train stations: Studio B
Hotel Arcsens is a gem. The location of the place is 1.5 min walking distant to E line and a nice stride to the JR line. Love the vibe of the area… way to really immerse yourself in Sumida while being steps away from Akihabara and the nearby towns.

【Ginza/Tokyo area】 Junior Suite (Free Wi-Fi)
This hotel was the best hotel of the two we stayed at in Tokyo and I wish I would have stayed here longer. It was walking distance to many attractions and restaurants and right next door to a Lawson's which made eating breakfast very easy in the mornings. The rooms was spacious, clean and had all you would need. I would not hesitate to stay here again if we return to Tokyo.

4 single beds in Tokyo/2 train stations : Studio A
Great spot for a group of four friends. Convenient location next to the Oedu line and walking distance from museums, Nakamoto-dori street, and more. Not much space for hanging out in the room, but if you’re spending your days doing activities around Tokyo it’s perfect.

Direct to Shinjuku, Shibuya, 2 min to Subway 201
The host was very nice, responsive, and thoughtful!The house is located near Kiyosumi Shirakawa, the environment is fresh and elegant, like!
Boutique Hotels with a patio

Skytree Station 5Airport Disney Direct Kitchen Washing Machine Wifi Elevator Amin Hotel
Comfortable beds. Central home. With elevator which is rare in Tokyo. The hosts are charming and very accommodating which is a plus to this accommodation. Recommended if staying in Tokyo.

TheMillennialsShibuya/Smart Pod Girls Only/1 Guest
Great stay, super comfy bed, quiet rooms, and clean common areas.

100-inch projection screen Skytree station 5 airport direct access to kitchen washing machine wifi
Kelly’s place came with many amenities and was within walling distance of the subway station and many other sights. I would definitely comeback again.

Izakaya Amin Hotel
Kelly was a great host, gave us detailed information for the arival and responded very quickly overall. Would recommend!
Quick stats about boutique hotel rentals in Shinjuku
Total rentals
30 properties
Nightly prices starting at
$109 AUD before taxes and fees
Total number of reviews
1.6K reviews
Wi-Fi availability
30 properties include access to Wi-Fi
Popular amenities
Kitchen, Wi-Fi and Pool
Local attractions
Shinjuku Station, Shinjuku Golden Gai and Kabukichō
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- Shinjuku Station
- Senso-ji Temple
- Tokyo Skytree
- Shinjuku Gyoen National Garden
- Kinshicho Sta.
- Ikebukuro Station
- Shibuya Station
- Tokyo Skytree Station
- Tokyo Sta.
- Sumida Park
- Tokyo Tower
- Tokyo Disneyland
- Kamata Sta.
- Keisei-Hikifune Station
- Tokyo Dome
- Kamakura Station
- Shinagawa Station
- Yoyogi Park
- Hakone-Yumoto Sta.
- Tokyo Disney Resort
- Yokohama Sta.
- Omiya Sta.
- Ueno Park
- Etchūjima Kamotsu Station
- Things to do Shinjuku
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